DECAMER-LIKE CONFORMATION OF A NANO-PEPTIDE BOUND TO HLA-B3501 DUE TO NONSTANDARD POSITIONING OF THE C-TERMINUS


Tab-View Sample


MHC-Binding
Epitope  
   
Complex PDB ID 1A9B
Accession Number 3DIEP0449
IEDB ID 78730
Epitope Sequence LPPLDITPY
Starting Position1
Ending Position9
Epitope Type Linear Epitope

Assay Information  
Assay Antigen Purified MHC - X-ray crystallography Structure (crystal; NMR; etc.)
PDB CategoryCOMPLEX (MHC CLASS I/PEPTIDE)
Keyword MHC CLASS I; HISTOCOMPATIBILITY COMPLEX; HLA B3501; COMPLEX (MHC CLASS I/PEPTIDE)
Antibody Residues Interacting with Antigen Open in new window      Download dimplot pdb file
Antibody Chain 1 PDB Chain A
Antigen PDB ChainC
CommentsThe yielding crystals belong to the space group P212121. This structure is identical to the structure of the same complex with the space group C2221 [PDB: 1A9E]. There are two copies of the MHC/Epitope in the crystallographic asymmetric unit. PDB chains for each complex are: Complex I : MHC ?-chain: A; ?2-microglobulin chain: B; epitope chain: C. Complex II : MHC ?-chain: D; ?2-microglobulin chain: E; epitope chain: F.

Experimental Details
Method
X-RAY DIFFRACTION
Resolution
3.2
R-Value
0.251
Space Group
P 21 21 21
Unit Cell
Length(Å) Angle(°)
a = 45.74 α = 90
b = 116.39 β = 90
c = 169.34 γ = 90



Fatal error: Uncaught Error: Call to undefined function mysql_connect() in /opt/lampp/htdocs/sedb/htdocs/tabview.php:6804 Stack trace: #0 {main} thrown in /opt/lampp/htdocs/sedb/htdocs/tabview.php on line 6804
Source Information  
Structure Determination Method X-RAY DIFFRACTION