Structure at 2.7 Angstrom Resolution of the Paracoccus Denitrificans two-subunit Cytochrome C Oxidase Complexed with an Antibody Fv Fragment


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B-Cell Epitope
Epitope  
   
Complex PDB ID 1AR1
Accession Number 3DIEP0007
IEDB ID Not available.
Epitope Sequence P(26_B)+HD(29-30_B)+W(33_B)+VGK(166-168_B)+SVDQE(205-209_B)+SQE(235-237_B)+E(240_B)
Starting Position26,29-30,33,166
Ending Position168,205-209,235-237,240
Epitope Type Discontinuous Epitope

Assay Information  
Assay Antigen Not available
PDB CategoryCOMPLEX (OXIDOREDUCTASE/ANTIBODY)
Keyword COMPLEX (OXIDOREDUCTASE/ANTIBODY); ELECTRON TRANSPORT; TRANSMEMBRANE; CYTOCHROME OXIDASE; ANTIBODY COMPLEX
Antibody Residues Interacting with Antigen Open in new window      Download dimplot pdb file
Antibody Chain 1 PDB Chain C
Antibody Chain 2 PDB ChainD
Antigen PDB ChainB
Contact Area for Antigen 657.3
Contact Area for Antibody690.8
CommentsNot available

Experimental Details
Method
X-RAY DIFFRACTION
Resolution
2.7
R-Value
0.207
Space Group
P 21 21 21
Unit Cell
Length(Å) Angle(°)
a = 93.5 α = 90
b = 151 β = 90
c = 156.7 γ = 90


Source Information  
Structure Determination Method X-RAY DIFFRACTION

Ligand
Ligand NameCOPPER (II) ION
Chem Name CU
Ligand NameMAGNESIUM ION
Chem Name MG
Ligand NameCALCIUM ION
Chem Name CA
Ligand NameHEME-A
Chem Name HEA
Ligand NameLAURYL DIMETHYLAMINE-N-OXIDE
Chem Name LDA




Sequence
Protein Name
LAURYL DIMETHYLAMINE-N-OXIDE
Poly type
polypeptide(L)
Sequence status
Complete

Err:Conn