NMR STRUCTURE OF THE 0.5B ANTI-HIV ANTIBODY COMPLEX WITH THE GP120 V3 PEPTIDE


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B-Cell Epitope
Epitope  
   
Complex PDB ID 1QNZ
Accession Number 3DIEP0106
IEDB ID Not available in IEDB.
Epitope Sequence KSIRIQRGPGRAFI
Starting Position2
Ending Position14,17
Epitope Type Discontinuous Epitope-KSIRIQRGPGRAF(2-14_P)+I(17_P)

Assay Information  
Assay Antigen Not available
PDB CategoryANTIBODY
Keyword ANTIBODY; V3 PEPTIDE; BINDING SITE
Antibody Residues Interacting with Antigen Open in new window      Download dimplot pdb file
Antibody Chain 1 PDB Chain H
Antibody Chain 2 PDB ChainL
Antigen PDB ChainP

Experimental Details
Experimental Method
SOLUTION NMR
Classification:
refinement
Refrences details:
THE STRUCTURE OF THE COMPLEX WAS DETERMINED ALLOWING THE ANTIBODY CDR RESIDUES AND THE COMPLEXED V3 PEPTIDE RESIDUES TO MOVE, WHILE THE ANTIBODY FRAMEWORK WAS HELD FIXED DURING REFINEMENT AND MODELED AS DESCRIBED PREVIOUSLY
Software:
X-PLOR 3.8
Manufacturer:
BRUKER


Source Information  
Structure Determination Method SOLUTION NMR

Ligand




Sequence
Protein Name
NMR STRUCTURE OF THE 0.5B ANTI-HIV ANTIBODY COMPLEX WITH THE GP120 V3 PEPTIDE
Poly type
polypeptide(L)
Sequence status
Complete

Err:Conn