DECAMER-LIKE CONFORMATION OF A NANO-PEPTIDE BOUND TO HLA-B3501 DUE TO NONSTANDARD POSITIONING OF THE C-TERMINUS


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MHC-Binding
Epitope  
   
Complex PDB ID 1A9E
Accession Number 3DIEP0448
IEDB ID 78730
Epitope Sequence LPPLDITPY
Starting Position1
Ending Position9
Epitope Type Linear Epitope

Assay Information  
Assay Antigen Purified MHC - X-ray crystallography Structure (crystal; NMR; etc.)
PDB CategoryCOMPLEX (MHC CLASS I/PEPTIDE)
Keyword MHC CLASS I; HISTOCOMPATIBILITY COMPLEX; HLA B3501; COMPLEX (MHC CLASS I/PEPTIDE)
Antibody Residues Interacting with Antigen Open in new window      Download dimplot pdb file
Antibody Chain 1 PDB Chain A
Antigen PDB ChainC
CommentsThe yielding crystals belong to the space group C222-1. Clear electron density was observed for all the epitope residues.

Experimental Details
Method
X-RAY DIFFRACTION
Resolution
2.5
R-Value
0.213
Space Group
C 2 2 21
Unit Cell
Length(Å) Angle(°)
a = 45.51 α = 90
b = 181.51 β = 90
c = 141.15 γ = 90



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Source Information  
Structure Determination Method X-RAY DIFFRACTION