HISTOCOMPATIBILITY ANTIGEN I-AG7


Tab-View Sample


MHC-Binding
Epitope  
   
Complex PDB ID 1F3J
Accession Number 3DIEP0402
IEDB ID 3138
Epitope Sequence AMKRHGLDNYRGYSL
Starting Position11
Ending Position24
Epitope Type Linear Epitope

Assay Information  
Assay Antigen "Purified MHC - X-ray crystallography Structure (crystal; NMR; etc.)"
PDB CategoryIMMUNE SYSTEM
Keyword HISTOCOMPATIBILITY ANTIGEN; MHC; PEPTIDE COMPLEX; IMMUNE SYSTEM
Antibody Residues Interacting with Antigen Open in new window      Download dimplot pdb file
Antibody Chain 1 PDB Chain A
Antigen PDB ChainP
CommentsDuring production of the complex; the epitope was covalently attached to the MHC ?-chain via a polypeptide linker.Two MHC-peptide complexes are included in the crystallographic asymmetric unit. PDB chains for each complex are: Complex I : ?-chain: A; ?-chain: B; epitope chain: P. Complex II : ?-chain: D; ?-chain: E; epitope chain: Q.The electron density for epitope residues P: Y23; S24; is not as well resolved as the core peptide in the final model.

Experimental Details
Method
X-RAY DIFFRACTION
Resolution
3.1
R-Value
0.221
Space Group
P 41 21 2
Unit Cell
Length(Å) Angle(°)
a = 109.54 α = 90
b = 109.54 β = 90
c = 176.36 γ = 90



Fatal error: Uncaught Error: Call to undefined function mysql_connect() in /opt/lampp/htdocs/sedb/htdocs/tabview.php:6804 Stack trace: #0 {main} thrown in /opt/lampp/htdocs/sedb/htdocs/tabview.php on line 6804
Source Information  
Structure Determination Method X-RAY DIFFRACTION